Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm9816-201ENSMUST00000122292 1414 ntBASIC14□□□□□ -0.17
Atxn1P54254 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Atxn1P54254 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atxn1P54254 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14□□□□□ -0.17
Atxn1P54254 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Atxn1P54254 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14□□□□□ -0.17
Atxn1P54254 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Atxn1P54254 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Atxn1P54254 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atxn1P54254 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Atxn1P54254 Mir1894-201ENSMUST00000122802 81 ntBASIC14□□□□□ -0.17
Atxn1P54254 Gm30437-201ENSMUST00000206086 1201 ntBASIC14□□□□□ -0.17
Atxn1P54254 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14□□□□□ -0.17
Atxn1P54254 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14□□□□□ -0.17
Atxn1P54254 AC156016.3-201ENSMUST00000228623 344 ntBASIC14□□□□□ -0.17
Atxn1P54254 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Atxn1P54254 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14□□□□□ -0.17
Atxn1P54254 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Atxn1P54254 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14□□□□□ -0.17
Atxn1P54254 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Atxn1P54254 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Atxn1P54254 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atxn1P54254 Gm45504-201ENSMUST00000211407 2107 ntBASIC14□□□□□ -0.17
Atxn1P54254 Gm43509-201ENSMUST00000196551 2594 ntBASIC14□□□□□ -0.17
Atxn1P54254 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atxn1P54254 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atxn1P54254 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atxn1P54254 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.99□□□□□ -0.17
Atxn1P54254 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.99□□□□□ -0.17
Atxn1P54254 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.99□□□□□ -0.17
Atxn1P54254 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.99□□□□□ -0.17
Atxn1P54254 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Gm14660-201ENSMUST00000119809 575 ntBASIC13.99□□□□□ -0.17
Atxn1P54254 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.99□□□□□ -0.17
Atxn1P54254 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.99□□□□□ -0.17
Atxn1P54254 AA619741-201ENSMUST00000195095 646 ntBASIC13.99□□□□□ -0.17
Atxn1P54254 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.99□□□□□ -0.17
Atxn1P54254 Gm17794-201ENSMUST00000220252 955 ntBASIC13.99□□□□□ -0.17
Atxn1P54254 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Atxn1P54254 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Atxn1P54254 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Atxn1P54254 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Atxn1P54254 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.98□□□□□ -0.17
Atxn1P54254 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Atxn1P54254 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Atxn1P54254 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Atxn1P54254 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Atxn1P54254 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Atxn1P54254 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Atxn1P54254 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Atxn1P54254 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Atxn1P54254 Mir7654-201ENSMUST00000185082 70 ntBASIC13.98□□□□□ -0.17
Atxn1P54254 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.98□□□□□ -0.17
Atxn1P54254 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.98□□□□□ -0.17
Atxn1P54254 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.98□□□□□ -0.17
Atxn1P54254 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.98□□□□□ -0.17
Atxn1P54254 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.98□□□□□ -0.17
Atxn1P54254 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Atxn1P54254 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.98□□□□□ -0.17
Atxn1P54254 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms