Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ercc3P49135 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ercc3P49135 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Ercc3P49135 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ercc3P49135 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ercc3P49135 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.74■□□□□ 0.27
Ercc3P49135 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Gm12882-201ENSMUST00000121696 517 ntBASIC16.74■□□□□ 0.27
Ercc3P49135 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Gm27306-201ENSMUST00000183970 107 ntBASIC16.74■□□□□ 0.27
Ercc3P49135 Mir7023-201ENSMUST00000185093 64 ntBASIC16.74■□□□□ 0.27
Ercc3P49135 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.74■□□□□ 0.27
Ercc3P49135 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.74■□□□□ 0.27
Ercc3P49135 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Ercc3P49135 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc3P49135 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Ercc3P49135 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.73■□□□□ 0.27
Ercc3P49135 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.73■□□□□ 0.27
Ercc3P49135 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.73■□□□□ 0.27
Ercc3P49135 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.73■□□□□ 0.27
Ercc3P49135 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Gm14767-201ENSMUST00000121559 586 ntBASIC16.73■□□□□ 0.27
Ercc3P49135 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.73■□□□□ 0.27
Ercc3P49135 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Ercc3P49135 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.73■□□□□ 0.27
Ercc3P49135 Gm27680-201ENSMUST00000184192 160 ntBASIC16.73■□□□□ 0.27
Ercc3P49135 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.73■□□□□ 0.27
Ercc3P49135 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ercc3P49135 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.73■□□□□ 0.27
Ercc3P49135 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.73■□□□□ 0.27
Ercc3P49135 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc3P49135 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.72■□□□□ 0.27
Ercc3P49135 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ercc3P49135 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.72■□□□□ 0.27
Ercc3P49135 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.72■□□□□ 0.27
Ercc3P49135 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ercc3P49135 AA619741-201ENSMUST00000195095 646 ntBASIC16.72■□□□□ 0.27
Ercc3P49135 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.72■□□□□ 0.27
Ercc3P49135 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.72■□□□□ 0.27
Ercc3P49135 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.72■□□□□ 0.27
Ercc3P49135 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms