Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sox2P48432 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox2P48432 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Sox2P48432 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox2P48432 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.23□□□□□ -0.29
Sox2P48432 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sox2P48432 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sox2P48432 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sox2P48432 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sox2P48432 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox2P48432 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Sox2P48432 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sox2P48432 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox2P48432 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox2P48432 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Sox2P48432 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.22□□□□□ -0.29
Sox2P48432 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox2P48432 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox2P48432 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Sox2P48432 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox2P48432 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox2P48432 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Sox2P48432 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sox2P48432 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sox2P48432 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox2P48432 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox2P48432 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox2P48432 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox2P48432 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sox2P48432 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox2P48432 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sox2P48432 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sox2P48432 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox2P48432 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox2P48432 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox2P48432 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox2P48432 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sox2P48432 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox2P48432 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.21□□□□□ -0.29
Sox2P48432 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox2P48432 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.21□□□□□ -0.29
Sox2P48432 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox2P48432 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms