Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps4bP46467 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.33□□□□□ -0.12
Vps4bP46467 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps4bP46467 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Vps4bP46467 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Vps4bP46467 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vps4bP46467 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps4bP46467 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vps4bP46467 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Vps4bP46467 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps4bP46467 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4bP46467 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4bP46467 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.32□□□□□ -0.12
Vps4bP46467 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vps4bP46467 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4bP46467 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4bP46467 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4bP46467 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Vps4bP46467 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4bP46467 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4bP46467 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vps4bP46467 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4bP46467 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps4bP46467 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Vps4bP46467 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Vps4bP46467 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.32□□□□□ -0.12
Vps4bP46467 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.32□□□□□ -0.12
Vps4bP46467 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps4bP46467 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.32□□□□□ -0.12
Vps4bP46467 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.32□□□□□ -0.12
Vps4bP46467 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4bP46467 Gm18057-201ENSMUST00000208220 503 ntBASIC14.32□□□□□ -0.12
Vps4bP46467 Gm45612-201ENSMUST00000211320 160 ntBASIC14.32□□□□□ -0.12
Vps4bP46467 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4bP46467 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4bP46467 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.32□□□□□ -0.12
Vps4bP46467 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vps4bP46467 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vps4bP46467 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4bP46467 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4bP46467 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vps4bP46467 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.31□□□□□ -0.12
Vps4bP46467 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vps4bP46467 Gm2810-201ENSMUST00000118681 990 ntBASIC14.31□□□□□ -0.12
Vps4bP46467 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Vps4bP46467 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.31□□□□□ -0.12
Vps4bP46467 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.31□□□□□ -0.12
Vps4bP46467 Chchd1-203ENSMUST00000224633 557 ntBASIC14.31□□□□□ -0.12
Vps4bP46467 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.31□□□□□ -0.12
Vps4bP46467 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Vps4bP46467 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Vps4bP46467 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vps4bP46467 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.31□□□□□ -0.12
Vps4bP46467 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4bP46467 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.31□□□□□ -0.12
Vps4bP46467 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vps4bP46467 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Vps4bP46467 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps4bP46467 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vps4bP46467 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.3□□□□□ -0.12
Vps4bP46467 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.3□□□□□ -0.12
Vps4bP46467 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps4bP46467 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.3□□□□□ -0.12
Vps4bP46467 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.3□□□□□ -0.12
Vps4bP46467 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Vps4bP46467 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.3□□□□□ -0.12
Vps4bP46467 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Vps4bP46467 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Vps4bP46467 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4bP46467 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms