Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.35□□□□□ -0.27
Cdx2P43241 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.35□□□□□ -0.27
Cdx2P43241 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx2P43241 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.35□□□□□ -0.27
Cdx2P43241 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx2P43241 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdx2P43241 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.35□□□□□ -0.27
Cdx2P43241 Olfr582-201ENSMUST00000098212 960 ntBASIC13.35□□□□□ -0.27
Cdx2P43241 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Cdx2P43241 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx2P43241 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx2P43241 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx2P43241 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx2P43241 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx2P43241 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx2P43241 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx2P43241 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.35□□□□□ -0.27
Cdx2P43241 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx2P43241 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx2P43241 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdx2P43241 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.34□□□□□ -0.27
Cdx2P43241 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Mir1247-201ENSMUST00000116706 82 ntBASIC13.34□□□□□ -0.27
Cdx2P43241 Gm15371-201ENSMUST00000117057 784 ntBASIC13.34□□□□□ -0.27
Cdx2P43241 Gm15198-201ENSMUST00000117283 177 ntBASIC13.34□□□□□ -0.27
Cdx2P43241 Gm13612-201ENSMUST00000119276 390 ntBASIC13.34□□□□□ -0.27
Cdx2P43241 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cdx2P43241 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdx2P43241 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.34□□□□□ -0.27
Cdx2P43241 Mir497b-201ENSMUST00000093601 125 ntBASIC13.34□□□□□ -0.27
Cdx2P43241 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Cdx2P43241 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cdx2P43241 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdx2P43241 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdx2P43241 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdx2P43241 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.33□□□□□ -0.27
Cdx2P43241 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cdx2P43241 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdx2P43241 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Cdx2P43241 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cdx2P43241 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdx2P43241 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.33□□□□□ -0.28
Cdx2P43241 Gm27572-201ENSMUST00000183702 255 ntBASIC13.33□□□□□ -0.28
Cdx2P43241 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.33□□□□□ -0.28
Cdx2P43241 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.33□□□□□ -0.28
Cdx2P43241 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.33□□□□□ -0.28
Cdx2P43241 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdx2P43241 Efs-202ENSMUST00000227037 2540 ntBASIC13.33□□□□□ -0.28
Cdx2P43241 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx2P43241 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx2P43241 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdx2P43241 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx2P43241 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx2P43241 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx2P43241 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdx2P43241 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms