Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Sox6P40645 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sox6P40645 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox6P40645 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.26□□□□□ -0.29
Sox6P40645 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.26□□□□□ -0.29
Sox6P40645 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.26□□□□□ -0.29
Sox6P40645 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.26□□□□□ -0.29
Sox6P40645 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.26□□□□□ -0.29
Sox6P40645 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Sox6P40645 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sox6P40645 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Sox6P40645 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox6P40645 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sox6P40645 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sox6P40645 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox6P40645 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.25□□□□□ -0.29
Sox6P40645 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.25□□□□□ -0.29
Sox6P40645 Gm9385-201ENSMUST00000117563 472 ntBASIC13.25□□□□□ -0.29
Sox6P40645 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox6P40645 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.25□□□□□ -0.29
Sox6P40645 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox6P40645 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.25□□□□□ -0.29
Sox6P40645 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.25□□□□□ -0.29
Sox6P40645 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sox6P40645 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox6P40645 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox6P40645 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox6P40645 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sox6P40645 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sox6P40645 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox6P40645 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.24□□□□□ -0.29
Sox6P40645 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.24□□□□□ -0.29
Sox6P40645 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.24□□□□□ -0.29
Sox6P40645 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox6P40645 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox6P40645 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.24□□□□□ -0.29
Sox6P40645 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.24□□□□□ -0.29
Sox6P40645 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sox6P40645 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sox6P40645 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox6P40645 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms