Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TfamP40630 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TfamP40630 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TfamP40630 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TfamP40630 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.67□□□□□ -0.22
TfamP40630 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TfamP40630 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
TfamP40630 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TfamP40630 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.67□□□□□ -0.22
TfamP40630 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.67□□□□□ -0.22
TfamP40630 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.67□□□□□ -0.22
TfamP40630 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
TfamP40630 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TfamP40630 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TfamP40630 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TfamP40630 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.66□□□□□ -0.22
TfamP40630 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.66□□□□□ -0.22
TfamP40630 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.66□□□□□ -0.22
TfamP40630 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.66□□□□□ -0.22
TfamP40630 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.66□□□□□ -0.22
TfamP40630 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Gm18737-201ENSMUST00000173594 937 ntBASIC13.66□□□□□ -0.22
TfamP40630 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.66□□□□□ -0.22
TfamP40630 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.66□□□□□ -0.22
TfamP40630 Gm18057-201ENSMUST00000208220 503 ntBASIC13.66□□□□□ -0.22
TfamP40630 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.66□□□□□ -0.22
TfamP40630 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.66□□□□□ -0.22
TfamP40630 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TfamP40630 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.66□□□□□ -0.22
TfamP40630 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.65□□□□□ -0.22
TfamP40630 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TfamP40630 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TfamP40630 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TfamP40630 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TfamP40630 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TfamP40630 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.65□□□□□ -0.22
TfamP40630 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.65□□□□□ -0.22
TfamP40630 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TfamP40630 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.65□□□□□ -0.22
TfamP40630 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TfamP40630 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TfamP40630 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
TfamP40630 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.65□□□□□ -0.22
TfamP40630 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.65□□□□□ -0.22
TfamP40630 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.65□□□□□ -0.22
TfamP40630 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms