Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd1P40201 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd1P40201 Gm8908-201ENSMUST00000121633 1024 ntBASIC20.78■□□□□ 0.92
Chd1P40201 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Chd1P40201 Gm45224-201ENSMUST00000208203 414 ntBASIC20.78■□□□□ 0.92
Chd1P40201 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd1P40201 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd1P40201 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC20.78■□□□□ 0.92
Chd1P40201 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1P40201 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Chd1P40201 Gm42901-201ENSMUST00000197735 3171 ntBASIC20.77■□□□□ 0.92
Chd1P40201 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC20.77■□□□□ 0.92
Chd1P40201 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC20.77■□□□□ 0.92
Chd1P40201 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1P40201 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1P40201 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1P40201 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chd1P40201 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Chd1P40201 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chd1P40201 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Chd1P40201 Gm15897-201ENSMUST00000117770 1486 ntBASIC20.76■□□□□ 0.91
Chd1P40201 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1P40201 Gm12134-201ENSMUST00000122109 520 ntBASIC20.76■□□□□ 0.91
Chd1P40201 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1P40201 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1P40201 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC20.76■□□□□ 0.91
Chd1P40201 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1P40201 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1P40201 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1P40201 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1P40201 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1P40201 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1P40201 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC20.76■□□□□ 0.91
Chd1P40201 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1P40201 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1P40201 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Chd1P40201 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1P40201 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Chd1P40201 Gm18734-201ENSMUST00000172937 808 ntBASIC20.75■□□□□ 0.91
Chd1P40201 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Chd1P40201 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC20.75■□□□□ 0.91
Chd1P40201 Gm3508-201ENSMUST00000186012 792 ntBASIC20.75■□□□□ 0.91
Chd1P40201 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1P40201 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1P40201 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Chd1P40201 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC20.75■□□□□ 0.91
Chd1P40201 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC20.75■□□□□ 0.91
Chd1P40201 Gm8856-201ENSMUST00000185254 1144 ntBASIC20.75■□□□□ 0.91
Chd1P40201 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1P40201 Gm4366-201ENSMUST00000201488 1342 ntBASIC20.75■□□□□ 0.91
Chd1P40201 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1P40201 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1P40201 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1P40201 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1P40201 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1P40201 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1P40201 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Chd1P40201 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1P40201 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1P40201 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1P40201 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Chd1P40201 Gm13813-201ENSMUST00000120998 787 ntBASIC20.74■□□□□ 0.91
Chd1P40201 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC20.74■□□□□ 0.91
Chd1P40201 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC20.74■□□□□ 0.91
Chd1P40201 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Chd1P40201 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Chd1P40201 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Chd1P40201 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
Chd1P40201 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1P40201 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1P40201 Gm44775-201ENSMUST00000207266 1456 ntBASIC20.74■□□□□ 0.91
Chd1P40201 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1P40201 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Chd1P40201 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC20.74■□□□□ 0.91
Chd1P40201 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1P40201 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC20.74■□□□□ 0.91
Chd1P40201 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC20.74■□□□□ 0.91
Chd1P40201 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC20.74■□□□□ 0.91
Chd1P40201 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1P40201 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1P40201 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1P40201 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1P40201 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC20.73■□□□□ 0.91
Chd1P40201 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Chd1P40201 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1P40201 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC20.73■□□□□ 0.91
Chd1P40201 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC20.73■□□□□ 0.91
Chd1P40201 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC20.73■□□□□ 0.91
Chd1P40201 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1P40201 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Chd1P40201 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1P40201 Gm43081-201ENSMUST00000199082 1380 ntBASIC20.73■□□□□ 0.91
Chd1P40201 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1P40201 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1P40201 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Chd1P40201 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Chd1P40201 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC20.73■□□□□ 0.91
Chd1P40201 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Chd1P40201 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1P40201 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms