Protein–RNA interactions for Protein: P39429

Traf2, TNF receptor-associated factor 2, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf2P39429 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 AA543401-201ENSMUST00000164248 1269 ntBASIC14.22□□□□□ -0.13
Traf2P39429 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Traf2P39429 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.22□□□□□ -0.13
Traf2P39429 Gm25144-201ENSMUST00000179561 110 ntBASIC14.22□□□□□ -0.13
Traf2P39429 Gm25352-201ENSMUST00000179815 110 ntBASIC14.22□□□□□ -0.13
Traf2P39429 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.22□□□□□ -0.13
Traf2P39429 Gm16476-201ENSMUST00000221544 139 ntBASIC14.22□□□□□ -0.13
Traf2P39429 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Traf2P39429 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Mir125a-201ENSMUST00000083545 68 ntBASIC14.22□□□□□ -0.13
Traf2P39429 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Traf2P39429 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.22□□□□□ -0.13
Traf2P39429 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Traf2P39429 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.22□□□□□ -0.13
Traf2P39429 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Traf2P39429 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Traf2P39429 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.21□□□□□ -0.13
Traf2P39429 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 Gm12428-201ENSMUST00000119844 727 ntBASIC14.21□□□□□ -0.13
Traf2P39429 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.21□□□□□ -0.13
Traf2P39429 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 AA619741-201ENSMUST00000195095 646 ntBASIC14.21□□□□□ -0.13
Traf2P39429 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 Gm44872-201ENSMUST00000207864 420 ntBASIC14.21□□□□□ -0.13
Traf2P39429 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 Gm6888-201ENSMUST00000221983 706 ntBASIC14.21□□□□□ -0.13
Traf2P39429 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.21□□□□□ -0.13
Traf2P39429 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Traf2P39429 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Traf2P39429 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Traf2P39429 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Traf2P39429 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.21□□□□□ -0.13
Traf2P39429 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Traf2P39429 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Traf2P39429 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Traf2P39429 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Traf2P39429 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Traf2P39429 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Traf2P39429 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Traf2P39429 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Traf2P39429 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Traf2P39429 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf2P39429 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Traf2P39429 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf2P39429 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Traf2P39429 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf2P39429 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf2P39429 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.2□□□□□ -0.14
Traf2P39429 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Traf2P39429 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf2P39429 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf2P39429 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf2P39429 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.2□□□□□ -0.14
Traf2P39429 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf2P39429 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Traf2P39429 Gm15920-201ENSMUST00000118998 402 ntBASIC14.2□□□□□ -0.14
Traf2P39429 Mir1897-201ENSMUST00000122581 272 ntBASIC14.2□□□□□ -0.14
Traf2P39429 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.2□□□□□ -0.14
Traf2P39429 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.2□□□□□ -0.14
Traf2P39429 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Traf2P39429 Gm17837-201ENSMUST00000186435 985 ntBASIC14.2□□□□□ -0.14
Traf2P39429 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Traf2P39429 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.2□□□□□ -0.14
Traf2P39429 Shd-206ENSMUST00000225145 998 ntBASIC14.2□□□□□ -0.14
Traf2P39429 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf2P39429 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Traf2P39429 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Traf2P39429 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf2P39429 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Traf2P39429 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Traf2P39429 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms