Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.05□□□□□ -0.32
Foxa1P35582 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Foxa1P35582 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Gm13453-201ENSMUST00000118708 357 ntBASIC13.05□□□□□ -0.32
Foxa1P35582 Gm14767-201ENSMUST00000121559 586 ntBASIC13.05□□□□□ -0.32
Foxa1P35582 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Foxa1P35582 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.05□□□□□ -0.32
Foxa1P35582 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.05□□□□□ -0.32
Foxa1P35582 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.05□□□□□ -0.32
Foxa1P35582 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.05□□□□□ -0.32
Foxa1P35582 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Foxa1P35582 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Foxa1P35582 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.05□□□□□ -0.32
Foxa1P35582 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Foxa1P35582 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Foxa1P35582 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Foxa1P35582 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Gm15920-201ENSMUST00000118998 402 ntBASIC13.04□□□□□ -0.32
Foxa1P35582 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.04□□□□□ -0.32
Foxa1P35582 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.04□□□□□ -0.32
Foxa1P35582 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.04□□□□□ -0.32
Foxa1P35582 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Foxa1P35582 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.04□□□□□ -0.32
Foxa1P35582 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Foxa1P35582 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Foxa1P35582 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.03□□□□□ -0.32
Foxa1P35582 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Foxa1P35582 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Foxa1P35582 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Foxa1P35582 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Foxa1P35582 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Foxa1P35582 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Foxa1P35582 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Foxa1P35582 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.03□□□□□ -0.32
Foxa1P35582 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Foxa1P35582 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Foxa1P35582 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.03□□□□□ -0.32
Foxa1P35582 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms