Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.17□□□□□ -0.14
RxrbP28704 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.17□□□□□ -0.14
RxrbP28704 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RxrbP28704 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RxrbP28704 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RxrbP28704 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RxrbP28704 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.16□□□□□ -0.14
RxrbP28704 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RxrbP28704 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RxrbP28704 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
RxrbP28704 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
RxrbP28704 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.16□□□□□ -0.14
RxrbP28704 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.16□□□□□ -0.14
RxrbP28704 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.16□□□□□ -0.14
RxrbP28704 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RxrbP28704 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.15□□□□□ -0.14
RxrbP28704 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.15□□□□□ -0.14
RxrbP28704 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RxrbP28704 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.15□□□□□ -0.14
RxrbP28704 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
RxrbP28704 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.15□□□□□ -0.14
RxrbP28704 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.15□□□□□ -0.14
RxrbP28704 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.15□□□□□ -0.14
RxrbP28704 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.15□□□□□ -0.14
RxrbP28704 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RxrbP28704 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RxrbP28704 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.15□□□□□ -0.14
RxrbP28704 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RxrbP28704 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.15□□□□□ -0.14
RxrbP28704 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RxrbP28704 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RxrbP28704 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RxrbP28704 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RxrbP28704 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.14□□□□□ -0.15
RxrbP28704 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.14□□□□□ -0.15
RxrbP28704 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RxrbP28704 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms