Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Col8a2P25318 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Gm7488-201ENSMUST00000117148 684 ntBASIC11.78□□□□□ -0.52
Col8a2P25318 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Col8a2P25318 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Col8a2P25318 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.78□□□□□ -0.52
Col8a2P25318 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.78□□□□□ -0.52
Col8a2P25318 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.78□□□□□ -0.52
Col8a2P25318 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Col8a2P25318 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Col8a2P25318 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.78□□□□□ -0.52
Col8a2P25318 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col8a2P25318 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col8a2P25318 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col8a2P25318 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col8a2P25318 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Col8a2P25318 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col8a2P25318 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col8a2P25318 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col8a2P25318 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col8a2P25318 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col8a2P25318 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col8a2P25318 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col8a2P25318 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col8a2P25318 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col8a2P25318 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col8a2P25318 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Gm22189-201ENSMUST00000103822 86 ntBASIC11.77□□□□□ -0.53
Col8a2P25318 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.77□□□□□ -0.53
Col8a2P25318 Gm14928-201ENSMUST00000120198 477 ntBASIC11.77□□□□□ -0.53
Col8a2P25318 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.77□□□□□ -0.53
Col8a2P25318 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.77□□□□□ -0.53
Col8a2P25318 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.77□□□□□ -0.53
Col8a2P25318 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.77□□□□□ -0.53
Col8a2P25318 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.77□□□□□ -0.53
Col8a2P25318 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.77□□□□□ -0.53
Col8a2P25318 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
Col8a2P25318 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Col8a2P25318 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col8a2P25318 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col8a2P25318 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col8a2P25318 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.76□□□□□ -0.53
Col8a2P25318 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col8a2P25318 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col8a2P25318 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col8a2P25318 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col8a2P25318 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col8a2P25318 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col8a2P25318 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col8a2P25318 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col8a2P25318 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col8a2P25318 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col8a2P25318 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.76□□□□□ -0.53
Col8a2P25318 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col8a2P25318 Gm12859-201ENSMUST00000117834 427 ntBASIC11.76□□□□□ -0.53
Col8a2P25318 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Col8a2P25318 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col8a2P25318 Gm12134-201ENSMUST00000122109 520 ntBASIC11.76□□□□□ -0.53
Col8a2P25318 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.76□□□□□ -0.53
Col8a2P25318 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Col8a2P25318 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.76□□□□□ -0.53
Col8a2P25318 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Col8a2P25318 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col8a2P25318 Gm21854-201ENSMUST00000179901 471 ntBASIC11.76□□□□□ -0.53
Col8a2P25318 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms