Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
NdnP25233 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NdnP25233 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NdnP25233 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NdnP25233 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NdnP25233 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NdnP25233 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NdnP25233 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.33□□□□□ -0.6
NdnP25233 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NdnP25233 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NdnP25233 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NdnP25233 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NdnP25233 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NdnP25233 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
NdnP25233 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.32□□□□□ -0.6
NdnP25233 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
NdnP25233 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
NdnP25233 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
NdnP25233 Gm10231-201ENSMUST00000181584 441 ntBASIC11.32□□□□□ -0.6
NdnP25233 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Gm10175-202ENSMUST00000208752 441 ntBASIC11.32□□□□□ -0.6
NdnP25233 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
NdnP25233 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
NdnP25233 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.32□□□□□ -0.6
NdnP25233 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
NdnP25233 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
NdnP25233 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.32□□□□□ -0.6
NdnP25233 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
NdnP25233 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NdnP25233 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.32□□□□□ -0.6
NdnP25233 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
NdnP25233 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
NdnP25233 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.31□□□□□ -0.6
NdnP25233 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
NdnP25233 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.31□□□□□ -0.6
NdnP25233 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
NdnP25233 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
NdnP25233 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
NdnP25233 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
NdnP25233 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NdnP25233 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NdnP25233 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
NdnP25233 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NdnP25233 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms