Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1aP25118 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Gm8584-201ENSMUST00000171982 758 ntBASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf1aP25118 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Gm2810-201ENSMUST00000118681 990 ntBASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Gm45612-201ENSMUST00000211320 160 ntBASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1aP25118 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1aP25118 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms