Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.42■□□□□ 0.06
Pde6bP23440 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pde6bP23440 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.41■□□□□ 0.06
Pde6bP23440 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.41■□□□□ 0.06
Pde6bP23440 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pde6bP23440 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.41■□□□□ 0.06
Pde6bP23440 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.41■□□□□ 0.06
Pde6bP23440 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.41■□□□□ 0.06
Pde6bP23440 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.41■□□□□ 0.06
Pde6bP23440 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.41■□□□□ 0.06
Pde6bP23440 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.41■□□□□ 0.06
Pde6bP23440 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.41■□□□□ 0.06
Pde6bP23440 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Pde6bP23440 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6bP23440 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pde6bP23440 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Pde6bP23440 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pde6bP23440 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pde6bP23440 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.4■□□□□ 0.06
Pde6bP23440 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pde6bP23440 Gm15460-201ENSMUST00000118147 391 ntBASIC15.4■□□□□ 0.06
Pde6bP23440 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.4■□□□□ 0.06
Pde6bP23440 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pde6bP23440 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.4■□□□□ 0.06
Pde6bP23440 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.4■□□□□ 0.06
Pde6bP23440 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Pde6bP23440 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Pde6bP23440 Acot6-202ENSMUST00000222921 3622 ntBASIC15.4■□□□□ 0.06
Pde6bP23440 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pde6bP23440 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6bP23440 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.4■□□□□ 0.06
Pde6bP23440 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Pde6bP23440 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Pde6bP23440 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.39■□□□□ 0.05
Pde6bP23440 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pde6bP23440 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Gm12138-201ENSMUST00000122180 951 ntBASIC15.39■□□□□ 0.05
Pde6bP23440 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pde6bP23440 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.39■□□□□ 0.05
Pde6bP23440 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.39■□□□□ 0.05
Pde6bP23440 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pde6bP23440 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.39■□□□□ 0.05
Pde6bP23440 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pde6bP23440 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.39■□□□□ 0.05
Pde6bP23440 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pde6bP23440 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6bP23440 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms