Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cbx3P23198 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cbx3P23198 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cbx3P23198 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cbx3P23198 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.85□□□□□ -0.35
Cbx3P23198 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cbx3P23198 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.85□□□□□ -0.35
Cbx3P23198 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.85□□□□□ -0.35
Cbx3P23198 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Cbx3P23198 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cbx3P23198 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.85□□□□□ -0.35
Cbx3P23198 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cbx3P23198 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cbx3P23198 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cbx3P23198 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cbx3P23198 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.84□□□□□ -0.35
Cbx3P23198 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cbx3P23198 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cbx3P23198 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Gm13312-201ENSMUST00000119631 718 ntBASIC12.84□□□□□ -0.35
Cbx3P23198 Gm13836-201ENSMUST00000121159 501 ntBASIC12.84□□□□□ -0.35
Cbx3P23198 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.84□□□□□ -0.35
Cbx3P23198 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Cbx3P23198 Gm6345-202ENSMUST00000180900 204 ntBASIC12.84□□□□□ -0.35
Cbx3P23198 Gm29518-201ENSMUST00000190858 372 ntBASIC12.84□□□□□ -0.35
Cbx3P23198 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cbx3P23198 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cbx3P23198 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cbx3P23198 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.84□□□□□ -0.35
Cbx3P23198 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cbx3P23198 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cbx3P23198 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cbx3P23198 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cbx3P23198 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cbx3P23198 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
Cbx3P23198 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.83□□□□□ -0.35
Cbx3P23198 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cbx3P23198 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cbx3P23198 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cbx3P23198 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cbx3P23198 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.83□□□□□ -0.36
Cbx3P23198 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cbx3P23198 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Cbx3P23198 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
Cbx3P23198 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cbx3P23198 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Cbx3P23198 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cbx3P23198 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cbx3P23198 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cbx3P23198 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cbx3P23198 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cbx3P23198 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cbx3P23198 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms