Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.19□□□□□ -0.3
Clk1P22518 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.19□□□□□ -0.3
Clk1P22518 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Clk1P22518 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.19□□□□□ -0.3
Clk1P22518 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.19□□□□□ -0.3
Clk1P22518 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Clk1P22518 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.19□□□□□ -0.3
Clk1P22518 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Clk1P22518 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.19□□□□□ -0.3
Clk1P22518 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.19□□□□□ -0.3
Clk1P22518 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clk1P22518 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Clk1P22518 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.18□□□□□ -0.3
Clk1P22518 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Clk1P22518 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Clk1P22518 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.18□□□□□ -0.3
Clk1P22518 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Clk1P22518 Gm25287-201ENSMUST00000103846 110 ntBASIC13.18□□□□□ -0.3
Clk1P22518 Gm22918-201ENSMUST00000103855 110 ntBASIC13.18□□□□□ -0.3
Clk1P22518 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.18□□□□□ -0.3
Clk1P22518 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.18□□□□□ -0.3
Clk1P22518 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.18□□□□□ -0.3
Clk1P22518 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Gm38225-201ENSMUST00000194001 393 ntBASIC13.18□□□□□ -0.3
Clk1P22518 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.18□□□□□ -0.3
Clk1P22518 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.18□□□□□ -0.3
Clk1P22518 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.18□□□□□ -0.3
Clk1P22518 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.18□□□□□ -0.3
Clk1P22518 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.18□□□□□ -0.3
Clk1P22518 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Clk1P22518 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Clk1P22518 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clk1P22518 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Clk1P22518 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.17□□□□□ -0.3
Clk1P22518 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Clk1P22518 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.17□□□□□ -0.3
Clk1P22518 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.17□□□□□ -0.3
Clk1P22518 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clk1P22518 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.17□□□□□ -0.3
Clk1P22518 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.17□□□□□ -0.3
Clk1P22518 Gm37935-201ENSMUST00000192012 982 ntBASIC13.17□□□□□ -0.3
Clk1P22518 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.17□□□□□ -0.3
Clk1P22518 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms