Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Gm28877-201ENSMUST00000191349 604 ntBASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Gm29541-201ENSMUST00000191351 678 ntBASIC11.62□□□□□ -0.55
Tnfrsf9P20334 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Gm6218-201ENSMUST00000219812 628 ntBASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.61□□□□□ -0.55
Tnfrsf9P20334 AC102523.2-201ENSMUST00000227813 983 ntBASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Gm25857-201ENSMUST00000082788 129 ntBASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfrsf9P20334 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfrsf9P20334 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms