Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TP20293 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TP20293 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.32□□□□□ -0.28
TP20293 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TP20293 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.32□□□□□ -0.28
TP20293 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.32□□□□□ -0.28
TP20293 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.32□□□□□ -0.28
TP20293 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TP20293 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.32□□□□□ -0.28
TP20293 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TP20293 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TP20293 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.31□□□□□ -0.28
TP20293 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.31□□□□□ -0.28
TP20293 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.31□□□□□ -0.28
TP20293 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TP20293 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.31□□□□□ -0.28
TP20293 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.31□□□□□ -0.28
TP20293 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TP20293 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Gm9824-201ENSMUST00000178707 561 ntBASIC13.31□□□□□ -0.28
TP20293 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.31□□□□□ -0.28
TP20293 Gm18049-201ENSMUST00000208909 581 ntBASIC13.31□□□□□ -0.28
TP20293 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Gm5867-201ENSMUST00000063197 592 ntBASIC13.31□□□□□ -0.28
TP20293 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TP20293 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.31□□□□□ -0.28
TP20293 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.31□□□□□ -0.28
TP20293 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TP20293 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.31□□□□□ -0.28
TP20293 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TP20293 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
TP20293 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.3□□□□□ -0.28
TP20293 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
TP20293 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.3□□□□□ -0.28
TP20293 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TP20293 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.3□□□□□ -0.28
TP20293 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Gm13015-201ENSMUST00000118674 204 ntBASIC13.3□□□□□ -0.28
TP20293 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.3□□□□□ -0.28
TP20293 Gm23547-201ENSMUST00000158210 271 ntBASIC13.3□□□□□ -0.28
TP20293 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Gm10275-202ENSMUST00000168697 495 ntBASIC13.3□□□□□ -0.28
TP20293 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.3□□□□□ -0.28
TP20293 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.3□□□□□ -0.28
TP20293 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Gm10275-201ENSMUST00000092620 635 ntBASIC13.3□□□□□ -0.28
TP20293 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TP20293 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms