Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Gm13365-201ENSMUST00000121188 973 ntBASIC12.55□□□□□ -0.4
P20040 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
P20040 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
P20040 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.55□□□□□ -0.4
P20040 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.55□□□□□ -0.4
P20040 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.55□□□□□ -0.4
P20040 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P20040 Acot6-202ENSMUST00000222921 3622 ntBASIC12.55□□□□□ -0.4
P20040 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
P20040 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
P20040 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.55□□□□□ -0.4
P20040 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P20040 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.54□□□□□ -0.4
P20040 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.54□□□□□ -0.4
P20040 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
P20040 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
P20040 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.54□□□□□ -0.4
P20040 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
P20040 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
P20040 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.54□□□□□ -0.4
P20040 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.54□□□□□ -0.4
P20040 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.54□□□□□ -0.4
P20040 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.54□□□□□ -0.4
P20040 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
P20040 Gm18057-201ENSMUST00000208220 503 ntBASIC12.54□□□□□ -0.4
P20040 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
P20040 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
P20040 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.54□□□□□ -0.4
P20040 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.54□□□□□ -0.4
P20040 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
P20040 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
P20040 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
P20040 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.54□□□□□ -0.4
P20040 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.54□□□□□ -0.4
P20040 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P20040 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
P20040 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.53□□□□□ -0.4
P20040 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
P20040 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Gm11543-201ENSMUST00000120758 370 ntBASIC12.53□□□□□ -0.4
P20040 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.53□□□□□ -0.4
P20040 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
P20040 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Gm18889-201ENSMUST00000174284 929 ntBASIC12.53□□□□□ -0.4
P20040 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P20040 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.53□□□□□ -0.4
P20040 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.53□□□□□ -0.4
P20040 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.53□□□□□ -0.4
P20040 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
P20040 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms