Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Usp53P15975 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp53P15975 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.29■□□□□ 0.2
Usp53P15975 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Usp53P15975 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp53P15975 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp53P15975 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp53P15975 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp53P15975 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp53P15975 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Usp53P15975 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Usp53P15975 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Usp53P15975 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Usp53P15975 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Gm4804-201ENSMUST00000182234 999 ntBASIC16.28■□□□□ 0.2
Usp53P15975 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Usp53P15975 Gm28631-201ENSMUST00000190740 334 ntBASIC16.28■□□□□ 0.2
Usp53P15975 Gm17795-201ENSMUST00000214505 757 ntBASIC16.28■□□□□ 0.2
Usp53P15975 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Usp53P15975 Mir497b-201ENSMUST00000093601 125 ntBASIC16.28■□□□□ 0.2
Usp53P15975 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.28■□□□□ 0.2
Usp53P15975 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.28■□□□□ 0.2
Usp53P15975 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Usp53P15975 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp53P15975 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp53P15975 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp53P15975 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Usp53P15975 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp53P15975 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp53P15975 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp53P15975 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp53P15975 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.27■□□□□ 0.2
Usp53P15975 Gm37917-201ENSMUST00000194711 392 ntBASIC16.27■□□□□ 0.2
Usp53P15975 Gm9794-201ENSMUST00000202370 423 ntBASIC16.27■□□□□ 0.2
Usp53P15975 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp53P15975 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.27■□□□□ 0.2
Usp53P15975 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp53P15975 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Usp53P15975 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp53P15975 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp53P15975 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp53P15975 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Usp53P15975 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp53P15975 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.27■□□□□ 0.19
Usp53P15975 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp53P15975 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Usp53P15975 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.27■□□□□ 0.19
Usp53P15975 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Usp53P15975 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.26■□□□□ 0.19
Usp53P15975 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp53P15975 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Gm12138-201ENSMUST00000122180 951 ntBASIC16.26■□□□□ 0.19
Usp53P15975 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Gm6745-201ENSMUST00000199216 526 ntBASIC16.26■□□□□ 0.19
Usp53P15975 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Gm7653-201ENSMUST00000214567 508 ntBASIC16.26■□□□□ 0.19
Usp53P15975 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
Usp53P15975 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Usp53P15975 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Usp53P15975 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Usp53P15975 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.26■□□□□ 0.19
Usp53P15975 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp53P15975 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms