Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.41□□□□□ -0.42
Ccl3P10855 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccl3P10855 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccl3P10855 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccl3P10855 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl3P10855 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccl3P10855 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.4□□□□□ -0.42
Ccl3P10855 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.4□□□□□ -0.42
Ccl3P10855 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccl3P10855 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Ccl3P10855 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccl3P10855 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccl3P10855 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccl3P10855 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Ccl3P10855 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccl3P10855 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.4□□□□□ -0.42
Ccl3P10855 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.4□□□□□ -0.42
Ccl3P10855 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccl3P10855 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Ccl3P10855 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Gm44397-201ENSMUST00000195950 113 ntBASIC12.4□□□□□ -0.42
Ccl3P10855 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.4□□□□□ -0.42
Ccl3P10855 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccl3P10855 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl3P10855 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccl3P10855 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccl3P10855 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccl3P10855 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccl3P10855 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccl3P10855 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccl3P10855 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccl3P10855 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ccl3P10855 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccl3P10855 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.39□□□□□ -0.43
Ccl3P10855 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccl3P10855 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccl3P10855 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Ccl3P10855 Gm13612-201ENSMUST00000119276 390 ntBASIC12.39□□□□□ -0.43
Ccl3P10855 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.39□□□□□ -0.43
Ccl3P10855 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Ccl3P10855 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.39□□□□□ -0.43
Ccl3P10855 Gm24196-201ENSMUST00000179161 110 ntBASIC12.39□□□□□ -0.43
Ccl3P10855 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Ccl3P10855 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.39□□□□□ -0.43
Ccl3P10855 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccl3P10855 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.39□□□□□ -0.43
Ccl3P10855 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ccl3P10855 Gm10012-201ENSMUST00000078252 192 ntBASIC12.39□□□□□ -0.43
Ccl3P10855 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.39□□□□□ -0.43
Ccl3P10855 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccl3P10855 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccl3P10855 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms