Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.93□□□□□ -0.66
Ccl1P10146 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC10.93□□□□□ -0.66
Ccl1P10146 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.93□□□□□ -0.66
Ccl1P10146 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC10.93□□□□□ -0.66
Ccl1P10146 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.93□□□□□ -0.66
Ccl1P10146 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.93□□□□□ -0.66
Ccl1P10146 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Gm9252-201ENSMUST00000172364 1602 ntBASIC10.93□□□□□ -0.66
Ccl1P10146 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccl1P10146 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl1P10146 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccl1P10146 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ccl1P10146 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ccl1P10146 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.92□□□□□ -0.66
Ccl1P10146 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ccl1P10146 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ccl1P10146 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ccl1P10146 Tcf21-202ENSMUST00000218002 1788 ntBASIC10.92□□□□□ -0.66
Ccl1P10146 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccl1P10146 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.92□□□□□ -0.66
Ccl1P10146 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ccl1P10146 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccl1P10146 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ccl1P10146 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.91□□□□□ -0.66
Ccl1P10146 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ccl1P10146 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ccl1P10146 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC10.91□□□□□ -0.66
Ccl1P10146 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ccl1P10146 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ccl1P10146 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 AC159106.1-201ENSMUST00000224421 690 ntBASIC10.91□□□□□ -0.66
Ccl1P10146 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ccl1P10146 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.91□□□□□ -0.66
Ccl1P10146 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ccl1P10146 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.91□□□□□ -0.66
Ccl1P10146 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ccl1P10146 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccl1P10146 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms