Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Col3a1P08121 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.64■□□□□ 0.25
Col3a1P08121 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.64■□□□□ 0.25
Col3a1P08121 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.64■□□□□ 0.25
Col3a1P08121 Gm15770-201ENSMUST00000117498 584 ntBASIC16.64■□□□□ 0.25
Col3a1P08121 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Col3a1P08121 Gm14660-201ENSMUST00000119809 575 ntBASIC16.64■□□□□ 0.25
Col3a1P08121 Gm11803-201ENSMUST00000119966 444 ntBASIC16.64■□□□□ 0.25
Col3a1P08121 Gm6152-201ENSMUST00000151704 340 ntBASIC16.64■□□□□ 0.25
Col3a1P08121 Snora78-201ENSMUST00000158630 128 ntBASIC16.64■□□□□ 0.25
Col3a1P08121 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.64■□□□□ 0.25
Col3a1P08121 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.64■□□□□ 0.25
Col3a1P08121 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.64■□□□□ 0.25
Col3a1P08121 Proscos-202ENSMUST00000178990 666 ntBASIC16.64■□□□□ 0.25
Col3a1P08121 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.64■□□□□ 0.25
Col3a1P08121 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.64■□□□□ 0.25
Col3a1P08121 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Col3a1P08121 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.64■□□□□ 0.25
Col3a1P08121 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Col3a1P08121 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col3a1P08121 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col3a1P08121 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Col3a1P08121 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
Col3a1P08121 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.63■□□□□ 0.25
Col3a1P08121 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Gm29608-201ENSMUST00000190444 463 ntBASIC16.63■□□□□ 0.25
Col3a1P08121 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.63■□□□□ 0.25
Col3a1P08121 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.63■□□□□ 0.25
Col3a1P08121 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.63■□□□□ 0.25
Col3a1P08121 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.63■□□□□ 0.25
Col3a1P08121 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Gm6091-201ENSMUST00000098307 165 ntBASIC16.63■□□□□ 0.25
Col3a1P08121 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.63■□□□□ 0.25
Col3a1P08121 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Col3a1P08121 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col3a1P08121 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col3a1P08121 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col3a1P08121 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col3a1P08121 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col3a1P08121 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.62■□□□□ 0.25
Col3a1P08121 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.62■□□□□ 0.25
Col3a1P08121 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.62■□□□□ 0.25
Col3a1P08121 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.62■□□□□ 0.25
Col3a1P08121 Gm12403-201ENSMUST00000121384 959 ntBASIC16.62■□□□□ 0.25
Col3a1P08121 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.62■□□□□ 0.25
Col3a1P08121 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.62■□□□□ 0.25
Col3a1P08121 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.62■□□□□ 0.25
Col3a1P08121 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.62■□□□□ 0.25
Col3a1P08121 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.62■□□□□ 0.25
Col3a1P08121 Gm45784-201ENSMUST00000188360 142 ntBASIC16.62■□□□□ 0.25
Col3a1P08121 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.62■□□□□ 0.25
Col3a1P08121 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.62■□□□□ 0.25
Col3a1P08121 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col3a1P08121 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col3a1P08121 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col3a1P08121 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col3a1P08121 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.62■□□□□ 0.25
Col3a1P08121 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col3a1P08121 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col3a1P08121 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col3a1P08121 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col3a1P08121 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.62■□□□□ 0.25
Col3a1P08121 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col3a1P08121 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col3a1P08121 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col3a1P08121 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col3a1P08121 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col3a1P08121 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms