Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.04■□□□□ 0.32
Col4a1P02463 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC17.04■□□□□ 0.32
Col4a1P02463 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Col4a1P02463 Gm11658-201ENSMUST00000120913 1008 ntBASIC17.04■□□□□ 0.32
Col4a1P02463 Gm1335-201ENSMUST00000121653 386 ntBASIC17.04■□□□□ 0.32
Col4a1P02463 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Gm2467-201ENSMUST00000182266 1010 ntBASIC17.04■□□□□ 0.32
Col4a1P02463 Gm6981-201ENSMUST00000182467 1008 ntBASIC17.04■□□□□ 0.32
Col4a1P02463 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.04■□□□□ 0.32
Col4a1P02463 Gm17330-201ENSMUST00000221047 165 ntBASIC17.04■□□□□ 0.32
Col4a1P02463 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col4a1P02463 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.04■□□□□ 0.32
Col4a1P02463 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a1P02463 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a1P02463 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a1P02463 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Col4a1P02463 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.03■□□□□ 0.32
Col4a1P02463 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col4a1P02463 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a1P02463 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.03■□□□□ 0.32
Col4a1P02463 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col4a1P02463 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a1P02463 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC17.03■□□□□ 0.32
Col4a1P02463 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a1P02463 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.03■□□□□ 0.32
Col4a1P02463 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a1P02463 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Col4a1P02463 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.03■□□□□ 0.32
Col4a1P02463 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC17.03■□□□□ 0.32
Col4a1P02463 Gm17823-201ENSMUST00000217830 1006 ntBASIC17.03■□□□□ 0.32
Col4a1P02463 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Col4a1P02463 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a1P02463 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Col4a1P02463 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a1P02463 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a1P02463 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Col4a1P02463 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a1P02463 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a1P02463 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col4a1P02463 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.02■□□□□ 0.32
Col4a1P02463 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a1P02463 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a1P02463 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Col4a1P02463 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC17.02■□□□□ 0.32
Col4a1P02463 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a1P02463 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a1P02463 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a1P02463 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Col4a1P02463 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a1P02463 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a1P02463 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a1P02463 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a1P02463 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.02■□□□□ 0.32
Col4a1P02463 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a1P02463 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Col4a1P02463 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Col4a1P02463 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Col4a1P02463 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a1P02463 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col4a1P02463 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col4a1P02463 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col4a1P02463 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Col4a1P02463 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col4a1P02463 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col4a1P02463 Gm5620-201ENSMUST00000077991 1348 ntBASIC17.02■□□□□ 0.31
Col4a1P02463 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Col4a1P02463 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Gm12384-201ENSMUST00000119228 919 ntBASIC17.01■□□□□ 0.31
Col4a1P02463 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.01■□□□□ 0.31
Col4a1P02463 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.01■□□□□ 0.31
Col4a1P02463 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.01■□□□□ 0.31
Col4a1P02463 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.01■□□□□ 0.31
Col4a1P02463 Itm2b-204ENSMUST00000228637 783 ntBASIC17.01■□□□□ 0.31
Col4a1P02463 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Col4a1P02463 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.01■□□□□ 0.31
Col4a1P02463 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.01■□□□□ 0.31
Col4a1P02463 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms