Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Slc6a20bO88575 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Gm37008-201ENSMUST00000195712 319 ntBASIC15.31■□□□□ 0.04
Slc6a20bO88575 Gm43118-201ENSMUST00000199149 775 ntBASIC15.31■□□□□ 0.04
Slc6a20bO88575 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Gm1335-201ENSMUST00000121653 386 ntBASIC15.3■□□□□ 0.04
Slc6a20bO88575 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Gm29199-201ENSMUST00000187766 775 ntBASIC15.3■□□□□ 0.04
Slc6a20bO88575 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc6a20bO88575 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.3■□□□□ 0.04
Slc6a20bO88575 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a20bO88575 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc6a20bO88575 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Gm15808-201ENSMUST00000119046 604 ntBASIC15.29■□□□□ 0.04
Slc6a20bO88575 Gm13342-201ENSMUST00000121055 207 ntBASIC15.29■□□□□ 0.04
Slc6a20bO88575 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.29■□□□□ 0.04
Slc6a20bO88575 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Gm43758-201ENSMUST00000199500 367 ntBASIC15.29■□□□□ 0.04
Slc6a20bO88575 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.29■□□□□ 0.04
Slc6a20bO88575 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Slc6a20bO88575 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.29■□□□□ 0.04
Slc6a20bO88575 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.29■□□□□ 0.04
Slc6a20bO88575 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Slc6a20bO88575 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a20bO88575 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.28■□□□□ 0.04
Slc6a20bO88575 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Gm10156-201ENSMUST00000122364 462 ntBASIC15.28■□□□□ 0.04
Slc6a20bO88575 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Gm27682-201ENSMUST00000183930 110 ntBASIC15.28■□□□□ 0.04
Slc6a20bO88575 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.28■□□□□ 0.04
Slc6a20bO88575 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc6a20bO88575 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms