Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Gm9396-201ENSMUST00000076703 567 ntBASIC17.15■□□□□ 0.34
Cops6O88545 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.15■□□□□ 0.34
Cops6O88545 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.15■□□□□ 0.34
Cops6O88545 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cops6O88545 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.14■□□□□ 0.33
Cops6O88545 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Gm4984-201ENSMUST00000115987 360 ntBASIC17.14■□□□□ 0.33
Cops6O88545 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.14■□□□□ 0.33
Cops6O88545 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.14■□□□□ 0.33
Cops6O88545 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17.14■□□□□ 0.33
Cops6O88545 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Cops6O88545 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cops6O88545 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cops6O88545 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.14■□□□□ 0.33
Cops6O88545 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.14■□□□□ 0.33
Cops6O88545 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cops6O88545 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.13■□□□□ 0.33
Cops6O88545 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.13■□□□□ 0.33
Cops6O88545 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cops6O88545 Gm27839-201ENSMUST00000184242 106 ntBASIC17.13■□□□□ 0.33
Cops6O88545 Gm29741-201ENSMUST00000192667 421 ntBASIC17.13■□□□□ 0.33
Cops6O88545 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.13■□□□□ 0.33
Cops6O88545 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC17.13■□□□□ 0.33
Cops6O88545 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.13■□□□□ 0.33
Cops6O88545 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.13■□□□□ 0.33
Cops6O88545 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.13■□□□□ 0.33
Cops6O88545 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cops6O88545 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cops6O88545 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cops6O88545 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Cops6O88545 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Cops6O88545 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cops6O88545 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cops6O88545 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Gm12928-201ENSMUST00000117115 573 ntBASIC17.12■□□□□ 0.33
Cops6O88545 Gm12390-201ENSMUST00000117897 397 ntBASIC17.12■□□□□ 0.33
Cops6O88545 Gm12485-201ENSMUST00000119641 291 ntBASIC17.12■□□□□ 0.33
Cops6O88545 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.12■□□□□ 0.33
Cops6O88545 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms