Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Banf1O54962 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Banf1O54962 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Banf1O54962 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Banf1O54962 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Banf1O54962 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Banf1O54962 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Banf1O54962 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Banf1O54962 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Banf1O54962 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Banf1O54962 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Banf1O54962 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Banf1O54962 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.34□□□□□ -0.11
Banf1O54962 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Banf1O54962 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.34□□□□□ -0.11
Banf1O54962 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.34□□□□□ -0.11
Banf1O54962 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Banf1O54962 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.34□□□□□ -0.11
Banf1O54962 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.34□□□□□ -0.11
Banf1O54962 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Banf1O54962 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Banf1O54962 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Banf1O54962 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Banf1O54962 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Banf1O54962 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Banf1O54962 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Banf1O54962 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Banf1O54962 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Banf1O54962 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Banf1O54962 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Banf1O54962 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
Banf1O54962 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Banf1O54962 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Banf1O54962 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Banf1O54962 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Banf1O54962 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Banf1O54962 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.33□□□□□ -0.12
Banf1O54962 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Banf1O54962 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
Banf1O54962 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Banf1O54962 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.33□□□□□ -0.12
Banf1O54962 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Banf1O54962 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.33□□□□□ -0.12
Banf1O54962 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Banf1O54962 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Banf1O54962 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Banf1O54962 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Banf1O54962 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.33□□□□□ -0.12
Banf1O54962 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Banf1O54962 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Banf1O54962 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Banf1O54962 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Banf1O54962 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Banf1O54962 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.33□□□□□ -0.12
Banf1O54962 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Banf1O54962 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Banf1O54962 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Banf1O54962 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.32□□□□□ -0.12
Banf1O54962 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Banf1O54962 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Gm11543-201ENSMUST00000120758 370 ntBASIC14.32□□□□□ -0.12
Banf1O54962 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.32□□□□□ -0.12
Banf1O54962 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Gm11025-201ENSMUST00000140773 466 ntBASIC14.32□□□□□ -0.12
Banf1O54962 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Banf1O54962 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.32□□□□□ -0.12
Banf1O54962 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Banf1O54962 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms