Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.59□□□□□ -0.39
Alx4O35137 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.59□□□□□ -0.39
Alx4O35137 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Alx4O35137 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Alx4O35137 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Alx4O35137 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Alx4O35137 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Alx4O35137 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Alx4O35137 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Alx4O35137 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.58□□□□□ -0.4
Alx4O35137 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Alx4O35137 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.58□□□□□ -0.4
Alx4O35137 Gm15957-201ENSMUST00000118893 974 ntBASIC12.58□□□□□ -0.4
Alx4O35137 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.58□□□□□ -0.4
Alx4O35137 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Alx4O35137 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Alx4O35137 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.58□□□□□ -0.4
Alx4O35137 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.58□□□□□ -0.4
Alx4O35137 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.58□□□□□ -0.4
Alx4O35137 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.58□□□□□ -0.4
Alx4O35137 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.58□□□□□ -0.4
Alx4O35137 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Alx4O35137 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Alx4O35137 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Alx4O35137 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Alx4O35137 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.57□□□□□ -0.4
Alx4O35137 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.57□□□□□ -0.4
Alx4O35137 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.57□□□□□ -0.4
Alx4O35137 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Alx4O35137 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Alx4O35137 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.57□□□□□ -0.4
Alx4O35137 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Alx4O35137 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.57□□□□□ -0.4
Alx4O35137 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Alx4O35137 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.57□□□□□ -0.4
Alx4O35137 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Alx4O35137 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Alx4O35137 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Alx4O35137 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms