Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf3O08791 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ebf3O08791 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Ebf3O08791 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.67□□□□□ -0.06
Ebf3O08791 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Gm11478-201ENSMUST00000117851 599 ntBASIC14.67□□□□□ -0.06
Ebf3O08791 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.67□□□□□ -0.06
Ebf3O08791 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.67□□□□□ -0.06
Ebf3O08791 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.67□□□□□ -0.06
Ebf3O08791 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.67□□□□□ -0.06
Ebf3O08791 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Ebf3O08791 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.67□□□□□ -0.06
Ebf3O08791 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.67□□□□□ -0.06
Ebf3O08791 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Gm15823-201ENSMUST00000064305 670 ntBASIC14.67□□□□□ -0.06
Ebf3O08791 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ebf3O08791 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Ebf3O08791 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ebf3O08791 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ebf3O08791 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.67□□□□□ -0.06
Ebf3O08791 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf3O08791 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.66□□□□□ -0.06
Ebf3O08791 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ebf3O08791 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Ebf3O08791 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ebf3O08791 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ebf3O08791 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Ebf3O08791 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Gm21854-201ENSMUST00000179901 471 ntBASIC14.66□□□□□ -0.06
Ebf3O08791 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.66□□□□□ -0.06
Ebf3O08791 AA619741-201ENSMUST00000195095 646 ntBASIC14.66□□□□□ -0.06
Ebf3O08791 Gm6916-202ENSMUST00000205523 195 ntBASIC14.66□□□□□ -0.06
Ebf3O08791 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.66□□□□□ -0.06
Ebf3O08791 Gm45668-201ENSMUST00000211271 493 ntBASIC14.66□□□□□ -0.06
Ebf3O08791 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.66□□□□□ -0.06
Ebf3O08791 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf3O08791 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.65□□□□□ -0.06
Ebf3O08791 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ebf3O08791 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ebf3O08791 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ebf3O08791 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ebf3O08791 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf3O08791 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.65□□□□□ -0.06
Ebf3O08791 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Ebf3O08791 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms