Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.88□□□□□ -0.35
Shisa8J3QNX5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shisa8J3QNX5 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Gm16198-201ENSMUST00000118766 670 ntBASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Gm16026-204ENSMUST00000162652 683 ntBASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shisa8J3QNX5 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Gm9182-201ENSMUST00000217829 639 ntBASIC12.86□□□□□ -0.35
Shisa8J3QNX5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Rps4l-201ENSMUST00000071745 943 ntBASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Gm10154-201ENSMUST00000084445 354 ntBASIC12.86□□□□□ -0.35
Shisa8J3QNX5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms