Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim55G3X8Y1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Gm9103-201ENSMUST00000119371 405 ntBASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim55G3X8Y1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Gm5587-201ENSMUST00000206270 674 ntBASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim55G3X8Y1 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Gm7284-201ENSMUST00000131667 944 ntBASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Gm9013-201ENSMUST00000132939 882 ntBASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim55G3X8Y1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.46□□□□□ -0.09
Trim55G3X8Y1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Gm25406-201ENSMUST00000157599 105 ntBASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim55G3X8Y1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms