Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Gm14127-201ENSMUST00000117906 678 ntBASIC14.3□□□□□ -0.12
Ccdc149F6V035 Gm12341-201ENSMUST00000119724 503 ntBASIC14.3□□□□□ -0.12
Ccdc149F6V035 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Gm18905-201ENSMUST00000205454 928 ntBASIC14.3□□□□□ -0.12
Ccdc149F6V035 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc149F6V035 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc149F6V035 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc149F6V035 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.29□□□□□ -0.12
Ccdc149F6V035 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc149F6V035 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.29□□□□□ -0.12
Ccdc149F6V035 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc149F6V035 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.29□□□□□ -0.12
Ccdc149F6V035 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc149F6V035 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.28□□□□□ -0.12
Ccdc149F6V035 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc149F6V035 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc149F6V035 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc149F6V035 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc149F6V035 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc149F6V035 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc149F6V035 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccdc149F6V035 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc149F6V035 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc149F6V035 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Ccdc149F6V035 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Gm15806-201ENSMUST00000120696 955 ntBASIC14.27□□□□□ -0.13
Ccdc149F6V035 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc149F6V035 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc149F6V035 Gm27701-201ENSMUST00000184498 110 ntBASIC14.27□□□□□ -0.13
Ccdc149F6V035 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms