Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm14460-201ENSMUST00000121511 639 ntBASIC13.77□□□□□ -0.2
Col6a3E9PWQ3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a3E9PWQ3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a3E9PWQ3 Mt1-202ENSMUST00000211807 1085 ntBASIC13.77□□□□□ -0.2
Col6a3E9PWQ3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a3E9PWQ3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a3E9PWQ3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a3E9PWQ3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.77□□□□□ -0.2
Col6a3E9PWQ3 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a3E9PWQ3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a3E9PWQ3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a3E9PWQ3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a3E9PWQ3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 Gm5369-201ENSMUST00000217499 588 ntBASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a3E9PWQ3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Gm43752-201ENSMUST00000198475 697 ntBASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Gm9996-201ENSMUST00000070359 913 ntBASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col6a3E9PWQ3 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Gm6867-201ENSMUST00000219165 425 ntBASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Gm31256-201ENSMUST00000194705 506 ntBASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col6a3E9PWQ3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Mir6546-201ENSMUST00000184460 62 ntBASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Gm19287-201ENSMUST00000203190 358 ntBASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.74□□□□□ -0.21
Col6a3E9PWQ3 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms