Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.63□□□□□ -0.39
Shank1D3YZU1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Gm38241-201ENSMUST00000192641 898 ntBASIC12.63□□□□□ -0.39
Shank1D3YZU1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Gm5425-201ENSMUST00000214125 459 ntBASIC12.63□□□□□ -0.39
Shank1D3YZU1 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shank1D3YZU1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Gm27486-201ENSMUST00000184923 80 ntBASIC12.62□□□□□ -0.39
Shank1D3YZU1 Gm6983-201ENSMUST00000214912 628 ntBASIC12.62□□□□□ -0.39
Shank1D3YZU1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.62□□□□□ -0.39
Shank1D3YZU1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Gm8749-201ENSMUST00000117737 331 ntBASIC12.62□□□□□ -0.39
Shank1D3YZU1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Shank1D3YZU1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.62□□□□□ -0.39
Shank1D3YZU1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.62□□□□□ -0.39
Shank1D3YZU1 Gm19078-201ENSMUST00000206311 727 ntBASIC12.62□□□□□ -0.39
Shank1D3YZU1 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Shank1D3YZU1 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.62□□□□□ -0.39
Shank1D3YZU1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shank1D3YZU1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.61□□□□□ -0.39
Shank1D3YZU1 Gm22018-201ENSMUST00000104357 131 ntBASIC12.61□□□□□ -0.39
Shank1D3YZU1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Mir3102-201ENSMUST00000175555 104 ntBASIC12.61□□□□□ -0.39
Shank1D3YZU1 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Gm7561-201ENSMUST00000211203 886 ntBASIC12.61□□□□□ -0.39
Shank1D3YZU1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Shank1D3YZU1 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.61□□□□□ -0.39
Shank1D3YZU1 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.61□□□□□ -0.39
Shank1D3YZU1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shank1D3YZU1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms