Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn7aB1AYL1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn7aB1AYL1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn7aB1AYL1 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn7aB1AYL1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Scn7aB1AYL1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Scn7aB1AYL1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC17.83■□□□□ 0.44
Scn7aB1AYL1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn7aB1AYL1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn7aB1AYL1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scn7aB1AYL1 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.83■□□□□ 0.44
Scn7aB1AYL1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scn7aB1AYL1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC17.83■□□□□ 0.44
Scn7aB1AYL1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scn7aB1AYL1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.83■□□□□ 0.44
Scn7aB1AYL1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn7aB1AYL1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn7aB1AYL1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Scn7aB1AYL1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Gm16372-201ENSMUST00000073088 450 ntBASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Scn7aB1AYL1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Gm19309-201ENSMUST00000218295 205 ntBASIC17.81■□□□□ 0.44
Scn7aB1AYL1 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.81■□□□□ 0.44
Scn7aB1AYL1 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Scn7aB1AYL1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Gm13350-201ENSMUST00000120519 479 ntBASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn7aB1AYL1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn7aB1AYL1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn7aB1AYL1 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.79■□□□□ 0.44
Scn7aB1AYL1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn7aB1AYL1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn7aB1AYL1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn7aB1AYL1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn7aB1AYL1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Scn7aB1AYL1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms