Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-1A0N8R1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-1A0N8R1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-1A0N8R1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-1A0N8R1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-1A0N8R1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trav12-1A0N8R1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-1A0N8R1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Gm18737-201ENSMUST00000173594 937 ntBASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Gm44492-201ENSMUST00000197012 141 ntBASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-1A0N8R1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Gm15957-201ENSMUST00000118893 974 ntBASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Gm18733-201ENSMUST00000173950 856 ntBASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-1A0N8R1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12-1A0N8R1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms