Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3854A0A1B0GSS6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm3854A0A1B0GSS6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm3854A0A1B0GSS6 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.08□□□□□ -0.15
Gm3854A0A1B0GSS6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm3854A0A1B0GSS6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm3854A0A1B0GSS6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
Gm3854A0A1B0GSS6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm12390-201ENSMUST00000117897 397 ntBASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm13385-201ENSMUST00000121089 220 ntBASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm15429-201ENSMUST00000151268 798 ntBASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm8927-201ENSMUST00000181978 981 ntBASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm27486-201ENSMUST00000184923 80 ntBASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm19078-201ENSMUST00000206311 727 ntBASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm3222-201ENSMUST00000071282 990 ntBASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3854A0A1B0GSS6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm12742-201ENSMUST00000117326 410 ntBASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm11524-201ENSMUST00000119349 807 ntBASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm6007-201ENSMUST00000208170 823 ntBASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3854A0A1B0GSS6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms