Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cfap99A0A140LIX9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cfap99A0A140LIX9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cfap99A0A140LIX9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cfap99A0A140LIX9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cfap99A0A140LIX9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cfap99A0A140LIX9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cfap99A0A140LIX9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.89■□□□□ 0.29
Cfap99A0A140LIX9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cfap99A0A140LIX9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cfap99A0A140LIX9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cfap99A0A140LIX9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Gm14042-201ENSMUST00000120139 833 ntBASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Gm42612-201ENSMUST00000197986 623 ntBASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Gm43170-201ENSMUST00000199827 612 ntBASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cfap99A0A140LIX9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Gm2451-201ENSMUST00000199447 999 ntBASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Gm10290-201ENSMUST00000200451 999 ntBASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cfap99A0A140LIX9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Gm22189-201ENSMUST00000103822 86 ntBASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Gm12091-201ENSMUST00000146791 830 ntBASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Gm9522-201ENSMUST00000182394 926 ntBASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Gm45453-201ENSMUST00000211758 853 ntBASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Gm9229-201ENSMUST00000222777 126 ntBASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cfap99A0A140LIX9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms