Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm9182-201ENSMUST00000217829 639 ntBASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Mypopos-202ENSMUST00000205975 2321 ntBASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm26513-201ENSMUST00000181802 2489 ntBASIC9.73□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm27628-201ENSMUST00000184911 107 ntBASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav13d-4A0A0G2JFX3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Gm16026-204ENSMUST00000162652 683 ntBASIC9.71□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Mir5131-201ENSMUST00000175426 93 ntBASIC9.71□□□□□ -0.86
Trav13d-4A0A0G2JFX3 Mir7036b-201ENSMUST00000184791 63 ntBASIC9.71□□□□□ -0.86
Trav13d-4A0A0G2JFX3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms