Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm14140-201ENSMUST00000119999 995 ntBASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Celf4-206ENSMUST00000224553 1729 ntBASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm25925-201ENSMUST00000158314 306 ntBASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav6n-6A0A075B6B2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm10499-201ENSMUST00000174094 934 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms