Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.57□□□□□ -0.56
Trav18A0A075B656 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.56□□□□□ -0.56
Trav18A0A075B656 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.56□□□□□ -0.56
Trav18A0A075B656 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.56□□□□□ -0.56
Trav18A0A075B656 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav18A0A075B656 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Gm20553-201ENSMUST00000204205 844 ntBASIC11.56□□□□□ -0.56
Trav18A0A075B656 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav18A0A075B656 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.56□□□□□ -0.56
Trav18A0A075B656 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav18A0A075B656 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.56□□□□□ -0.56
Trav18A0A075B656 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav18A0A075B656 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav18A0A075B656 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.55□□□□□ -0.56
Trav18A0A075B656 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Mir3113-201ENSMUST00000175478 76 ntBASIC11.55□□□□□ -0.56
Trav18A0A075B656 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav18A0A075B656 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.55□□□□□ -0.56
Trav18A0A075B656 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav18A0A075B656 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav18A0A075B656 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav18A0A075B656 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms