Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav5-4A0A075B652 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Trav5-4A0A075B652 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav5-4A0A075B652 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav5-4A0A075B652 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trav5-4A0A075B652 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav5-4A0A075B652 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Gm27920-201ENSMUST00000183953 96 ntBASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trav5-4A0A075B652 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Gm11543-201ENSMUST00000120758 370 ntBASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5-4A0A075B652 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms