Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.86□□□□□ -0.67
PdfS4R2K0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
PdfS4R2K0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
PdfS4R2K0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.85□□□□□ -0.67
PdfS4R2K0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.85□□□□□ -0.67
PdfS4R2K0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
PdfS4R2K0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.85□□□□□ -0.67
PdfS4R2K0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
PdfS4R2K0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.85□□□□□ -0.67
PdfS4R2K0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.85□□□□□ -0.67
PdfS4R2K0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Gm10499-201ENSMUST00000174094 934 ntBASIC10.85□□□□□ -0.67
PdfS4R2K0 Mir5131-201ENSMUST00000175426 93 ntBASIC10.85□□□□□ -0.67
PdfS4R2K0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC10.85□□□□□ -0.67
PdfS4R2K0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Gm6550-201ENSMUST00000187574 993 ntBASIC10.85□□□□□ -0.67
PdfS4R2K0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
PdfS4R2K0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
PdfS4R2K0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
PdfS4R2K0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
PdfS4R2K0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
PdfS4R2K0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PdfS4R2K0 Gm42471-201ENSMUST00000201457 1865 ntBASIC10.85□□□□□ -0.67
PdfS4R2K0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
PdfS4R2K0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
PdfS4R2K0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
PdfS4R2K0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Gm12350-201ENSMUST00000121208 462 ntBASIC10.84□□□□□ -0.67
PdfS4R2K0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
PdfS4R2K0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Gm18206-201ENSMUST00000207027 926 ntBASIC10.84□□□□□ -0.67
PdfS4R2K0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
PdfS4R2K0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.84□□□□□ -0.67
PdfS4R2K0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
PdfS4R2K0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.84□□□□□ -0.67
PdfS4R2K0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.84□□□□□ -0.67
PdfS4R2K0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.84□□□□□ -0.67
PdfS4R2K0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PdfS4R2K0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
PdfS4R2K0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms