Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb2S4R1M3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Gm5566-201ENSMUST00000116118 459 ntBASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
H2afb2S4R1M3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Gm37935-201ENSMUST00000192012 982 ntBASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Gm10253-201ENSMUST00000194270 940 ntBASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
H2afb2S4R1M3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Gm9719-201ENSMUST00000162765 543 ntBASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Gm5312-201ENSMUST00000203728 547 ntBASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.13□□□□□ -0.15
H2afb2S4R1M3 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb2S4R1M3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms