Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Gm29705-201ENSMUST00000212598 474 ntBASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Gm19309-201ENSMUST00000218295 205 ntBASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hdac6Q9Z2V5 Sybu-209ENSMUST00000228639 4113 ntBASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Gm8213-201ENSMUST00000118191 441 ntBASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Gm45880-201ENSMUST00000213041 853 ntBASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac6Q9Z2V5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Gm9823-201ENSMUST00000051212 327 ntBASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac6Q9Z2V5 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Gm5687-201ENSMUST00000118252 640 ntBASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Gm19184-201ENSMUST00000196798 928 ntBASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms