Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl40Q9Z2Q5 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Mir8102-201ENSMUST00000184148 139 ntBASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm18766-201ENSMUST00000189811 808 ntBASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl40Q9Z2Q5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm5866-201ENSMUST00000177881 973 ntBASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm27437-201ENSMUST00000183429 107 ntBASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm5186-201ENSMUST00000218781 920 ntBASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl40Q9Z2Q5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Rubie-203ENSMUST00000227803 2430 ntBASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms