Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lhx9Q9WUH2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Gm9522-201ENSMUST00000182394 926 ntBASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Gm28631-201ENSMUST00000190740 334 ntBASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Lhx9Q9WUH2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Gm14928-201ENSMUST00000120198 477 ntBASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx9Q9WUH2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Gm22189-201ENSMUST00000103822 86 ntBASIC13.4□□□□□ -0.26
Lhx9Q9WUH2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms