Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Gm38225-201ENSMUST00000194001 393 ntBASIC13.33□□□□□ -0.28
Trim3Q9R1R2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim3Q9R1R2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Olfr286-202ENSMUST00000205305 969 ntBASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim3Q9R1R2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Mir449b-201ENSMUST00000104833 80 ntBASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.32□□□□□ -0.28
Trim3Q9R1R2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim3Q9R1R2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Gm15920-201ENSMUST00000118998 402 ntBASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Gm13616-201ENSMUST00000120600 222 ntBASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Gm10253-201ENSMUST00000194270 940 ntBASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.31□□□□□ -0.28
Trim3Q9R1R2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trim3Q9R1R2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms