Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Gm10434-201ENSMUST00000101158 471 ntBASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Gm26185-201ENSMUST00000157692 266 ntBASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Mir1943-201ENSMUST00000158276 73 ntBASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Gm13570-201ENSMUST00000140763 309 ntBASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Col4a4Q9QZR9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Gm44069-201ENSMUST00000204898 506 ntBASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col4a4Q9QZR9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Gm13316-201ENSMUST00000140537 691 ntBASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Gm15276-201ENSMUST00000145953 498 ntBASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Gm38144-201ENSMUST00000192790 465 ntBASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Gm37042-201ENSMUST00000193816 581 ntBASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 AU022133-201ENSMUST00000200601 873 ntBASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Col4a4Q9QZR9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms